7.1.3. cobrame.io package

7.1.3.1. Submodules

7.1.3.2. cobrame.io.dict module

cobrame.io.dict.get_numeric_from_string(string)

Parameters:string (str) – String representation of numeric expression Returns:Numeric representation of string Return type:float or sympy expression

cobrame.io.dict.get_sympy_expression(value)

Return sympy expression from json string using sympify

mu is assumed to be positive but using sympify does not apply this assumption. The mu symbol produced from sympify is replaced with cobrame’s mu value to ensure the expression can be used in the model.

Parameters:value (str) – String representation of mu containing expression Returns:Numeric representation of string with cobrame’s mu symbol substituted Return type:sympy expression

cobrame.io.dict.me_model_from_dict(obj)

Load ME-model from its dictionary representation. This will return a full MEModel object identical to the one saved.

Parameters:obj (dict) – Dictionary representation of ME-model Returns:Full COBRAme ME-model Return type:MEModel

cobrame.io.dict.me_model_to_dict(model)

Create dictionary representation of full ME-model

Parameters:model (MEModel) – Returns:Dictionary representation of ME-model Return type:dict

7.1.3.3. cobrame.io.json module

7.1.3.4. Module contents